5  Exercises

For this tutorial, we will use the results from Practical 13, where we analyzed a single-cell ATAC-seq dataset of human peripheral blood mononuclear cells (PBMCs). Additionally, we will use the pre-processed Seurat object available here.

Exercise in Google Colab

1. Create a copy of the Google colab notebook part 14 on your one drive.
2. Run the exercise.

5.1 References

• Signac tutorial - Analyzing PBMC scATAC-seq (Signac tutorial)
• Signac tutorial - Analyzing PBMC scATAC-seq