Curated list of genes associated with Gene Ontology terms related to dendritic cells, grouped by biological process. Used to explore canonical dendritic cell differentiation pathways (Figure 5B of the article).
Format
A data frame with 94 rows and 4 columns:
- gene
Gene symbol.
- process
Biological process (e.g.,
"DC differentiation","Migration","TAM signaling").- GOterm
Group of Gene Ontology terms used to select the gene.
- info
Gene Ontology term associated with the gene.
Source
Gene Ontology annotations (https://geneontology.org).
Examples
table(dc_genes$process)
#>
#> Adhesion molecules Antigen processing and presentation
#> 1 7
#> Apoptosis Chemokine receptors
#> 6 6
#> Cytokine production DC differentiation
#> 4 13
#> DC-specific Growth factors
#> 3 1
#> Immune checkpoints Immune modulators
#> 2 5
#> Lipid metabolism Migration
#> 2 7
#> Pattern recognition Protein processing
#> 7 2
#> Signaling kinases TAM signaling
#> 5 13
#> Transcription factors Transport and Metabolism
#> 9 1